Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.25■□□□□ 0.51
Otop1Q80VM9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.25■□□□□ 0.51
Otop1Q80VM9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Otop1Q80VM9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Otop1Q80VM9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Otop1Q80VM9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.24■□□□□ 0.51
Otop1Q80VM9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Otop1Q80VM9 Gm26524-201ENSMUST00000192339 390 ntBASIC18.24■□□□□ 0.51
Otop1Q80VM9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.24■□□□□ 0.51
Otop1Q80VM9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Otop1Q80VM9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Otop1Q80VM9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Otop1Q80VM9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.23■□□□□ 0.51
Otop1Q80VM9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.23■□□□□ 0.51
Otop1Q80VM9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Otop1Q80VM9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Rab3c-203ENSMUST00000224180 967 ntBASIC18.22■□□□□ 0.51
Otop1Q80VM9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Otop1Q80VM9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Otop1Q80VM9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Otop1Q80VM9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Otop1Q80VM9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.2■□□□□ 0.5
Otop1Q80VM9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Otop1Q80VM9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Otop1Q80VM9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Otop1Q80VM9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Otop1Q80VM9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Otop1Q80VM9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Otop1Q80VM9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Otop1Q80VM9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms