Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr5Q80TP3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr5Q80TP3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Ubr5Q80TP3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr5Q80TP3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.75■□□□□ 0.27
Ubr5Q80TP3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr5Q80TP3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr5Q80TP3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr5Q80TP3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.75■□□□□ 0.27
Ubr5Q80TP3 AA386476-201ENSMUST00000098781 1665 ntBASIC16.75■□□□□ 0.27
Ubr5Q80TP3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr5Q80TP3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Gm13559-201ENSMUST00000120476 863 ntBASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr5Q80TP3 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr5Q80TP3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Gm33142-201ENSMUST00000193913 867 ntBASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr5Q80TP3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubr5Q80TP3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubr5Q80TP3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.71■□□□□ 0.26
Ubr5Q80TP3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubr5Q80TP3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubr5Q80TP3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Gm21814-202ENSMUST00000203277 873 ntBASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ubr5Q80TP3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubr5Q80TP3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms