Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Csmd3Q80T79 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Csmd3Q80T79 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.23□□□□□ -0.29
Csmd3Q80T79 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Csmd3Q80T79 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.23□□□□□ -0.29
Csmd3Q80T79 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Csmd3Q80T79 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Csmd3Q80T79 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Gm2399-201ENSMUST00000104944 225 ntBASIC13.21□□□□□ -0.29
Csmd3Q80T79 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.21□□□□□ -0.29
Csmd3Q80T79 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Csmd3Q80T79 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Csmd3Q80T79 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC13.21□□□□□ -0.3
Csmd3Q80T79 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Csmd3Q80T79 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Csmd3Q80T79 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Csmd3Q80T79 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Csmd3Q80T79 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Csmd3Q80T79 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.2□□□□□ -0.3
Csmd3Q80T79 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Gm43799-201ENSMUST00000201845 579 ntBASIC13.2□□□□□ -0.3
Csmd3Q80T79 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.2□□□□□ -0.3
Csmd3Q80T79 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Gm6659-201ENSMUST00000174752 547 ntBASIC13.2□□□□□ -0.3
Csmd3Q80T79 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Csmd3Q80T79 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.19□□□□□ -0.3
Csmd3Q80T79 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.19□□□□□ -0.3
Csmd3Q80T79 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.19□□□□□ -0.3
Csmd3Q80T79 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.18□□□□□ -0.3
Csmd3Q80T79 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Gm21362-201ENSMUST00000194272 928 ntBASIC13.18□□□□□ -0.3
Csmd3Q80T79 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.18□□□□□ -0.3
Csmd3Q80T79 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.18□□□□□ -0.3
Csmd3Q80T79 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Csmd3Q80T79 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms