Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim17Q7TPM3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim17Q7TPM3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim17Q7TPM3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim17Q7TPM3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim17Q7TPM3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim17Q7TPM3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim17Q7TPM3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.69■□□□□ 0.74
Trim17Q7TPM3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Trmt13-210ENSMUST00000198454 880 ntBASIC19.68■□□□□ 0.74
Trim17Q7TPM3 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim17Q7TPM3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.67■□□□□ 0.74
Trim17Q7TPM3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.67■□□□□ 0.74
Trim17Q7TPM3 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim17Q7TPM3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim17Q7TPM3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim17Q7TPM3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim17Q7TPM3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim17Q7TPM3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim17Q7TPM3 Mir6982-201ENSMUST00000184354 68 ntBASIC19.64■□□□□ 0.73
Trim17Q7TPM3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim17Q7TPM3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim17Q7TPM3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim17Q7TPM3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim17Q7TPM3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim17Q7TPM3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim17Q7TPM3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim17Q7TPM3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim17Q7TPM3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim17Q7TPM3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Trim17Q7TPM3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim17Q7TPM3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim17Q7TPM3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms