Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim46Q7TNM2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Gm40848-201ENSMUST00000221998 324 ntBASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim46Q7TNM2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim46Q7TNM2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim46Q7TNM2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim46Q7TNM2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim46Q7TNM2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim46Q7TNM2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trim46Q7TNM2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim46Q7TNM2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 BC021767-201ENSMUST00000126387 1716 ntBASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim46Q7TNM2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim46Q7TNM2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Gm43060-201ENSMUST00000200621 289 ntBASIC17.8■□□□□ 0.44
Trim46Q7TNM2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim46Q7TNM2 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms