Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Lsm8Q6ZWM4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm8Q6ZWM4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm8Q6ZWM4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm8Q6ZWM4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm8Q6ZWM4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm8Q6ZWM4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm8Q6ZWM4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Lsm8Q6ZWM4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Gm38205-201ENSMUST00000192243 258 ntBASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm8Q6ZWM4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms