Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Golph3-202ENSMUST00000226517 2359 ntBASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shc4Q6S5L9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 AA386476-201ENSMUST00000098781 1665 ntBASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shc4Q6S5L9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shc4Q6S5L9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shc4Q6S5L9 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.77■□□□□ 0.44
Shc4Q6S5L9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Shc4Q6S5L9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Shc4Q6S5L9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shc4Q6S5L9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shc4Q6S5L9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Shc4Q6S5L9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.76■□□□□ 0.43
Shc4Q6S5L9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shc4Q6S5L9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shc4Q6S5L9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shc4Q6S5L9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shc4Q6S5L9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shc4Q6S5L9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shc4Q6S5L9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shc4Q6S5L9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shc4Q6S5L9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shc4Q6S5L9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shc4Q6S5L9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shc4Q6S5L9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms