Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc85bQ6PDY0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc85bQ6PDY0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc85bQ6PDY0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc85bQ6PDY0 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.83■□□□□ 0.76
Ccdc85bQ6PDY0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc85bQ6PDY0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc85bQ6PDY0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc85bQ6PDY0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.81■□□□□ 0.76
Ccdc85bQ6PDY0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Dio3-201ENSMUST00000097228 1449 ntBASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Mir1199-201ENSMUST00000117015 119 ntBASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Gm18666-201ENSMUST00000190039 958 ntBASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Gm43799-201ENSMUST00000201845 579 ntBASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc85bQ6PDY0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Gm27741-201ENSMUST00000185060 237 ntBASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc85bQ6PDY0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Gm15378-201ENSMUST00000121894 207 ntBASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc85bQ6PDY0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Gm11249-201ENSMUST00000117071 859 ntBASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Gm6433-201ENSMUST00000118634 875 ntBASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc85bQ6PDY0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc85bQ6PDY0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms