Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.22■□□□□ 0.67
Casc4Q6P2L7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Casc4Q6P2L7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Casc4Q6P2L7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.22■□□□□ 0.67
Casc4Q6P2L7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc4Q6P2L7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc4Q6P2L7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc4Q6P2L7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Gm18284-201ENSMUST00000172604 624 ntBASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Gm10493-201ENSMUST00000097270 612 ntBASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.2■□□□□ 0.66
Casc4Q6P2L7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Gm5874-201ENSMUST00000096101 508 ntBASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casc4Q6P2L7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.18■□□□□ 0.66
Casc4Q6P2L7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.17■□□□□ 0.66
Casc4Q6P2L7 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.17■□□□□ 0.66
Casc4Q6P2L7 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.17■□□□□ 0.66
Casc4Q6P2L7 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Casc4Q6P2L7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casc4Q6P2L7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Gm8495-201ENSMUST00000188740 694 ntBASIC19.15■□□□□ 0.66
Casc4Q6P2L7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Casc4Q6P2L7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Casc4Q6P2L7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Casc4Q6P2L7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms