Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt39Q6IFX4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Krt39Q6IFX4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.03■□□□□ 0.96
Krt39Q6IFX4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Gm21956-201ENSMUST00000179946 522 ntBASIC21.02■□□□□ 0.96
Krt39Q6IFX4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt39Q6IFX4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.02■□□□□ 0.95
Krt39Q6IFX4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Krt39Q6IFX4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
Krt39Q6IFX4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt39Q6IFX4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Krt39Q6IFX4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21■□□□□ 0.95
Krt39Q6IFX4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt39Q6IFX4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.99■□□□□ 0.95
Krt39Q6IFX4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt39Q6IFX4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Krt39Q6IFX4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Krt39Q6IFX4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Krt39Q6IFX4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt39Q6IFX4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt39Q6IFX4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Krt39Q6IFX4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt39Q6IFX4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt39Q6IFX4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt39Q6IFX4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt39Q6IFX4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Krt39Q6IFX4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt39Q6IFX4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt39Q6IFX4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt39Q6IFX4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt39Q6IFX4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms