Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cep290Q6A078 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cep290Q6A078 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.65■□□□□ 0.74
Cep290Q6A078 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cep290Q6A078 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cep290Q6A078 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Cep290Q6A078 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cep290Q6A078 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.64■□□□□ 0.74
Cep290Q6A078 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.64■□□□□ 0.74
Cep290Q6A078 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cep290Q6A078 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cep290Q6A078 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cep290Q6A078 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cep290Q6A078 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cep290Q6A078 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cep290Q6A078 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cep290Q6A078 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.63■□□□□ 0.73
Cep290Q6A078 Gm7889-201ENSMUST00000185591 958 ntBASIC19.63■□□□□ 0.73
Cep290Q6A078 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.63■□□□□ 0.73
Cep290Q6A078 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cep290Q6A078 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cep290Q6A078 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cep290Q6A078 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Gm23634-201ENSMUST00000175071 91 ntBASIC19.62■□□□□ 0.73
Cep290Q6A078 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Cep290Q6A078 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cep290Q6A078 Gm21814-202ENSMUST00000203277 873 ntBASIC19.61■□□□□ 0.73
Cep290Q6A078 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Gm13559-201ENSMUST00000120476 863 ntBASIC19.61■□□□□ 0.73
Cep290Q6A078 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cep290Q6A078 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cep290Q6A078 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cep290Q6A078 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.6■□□□□ 0.73
Cep290Q6A078 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cep290Q6A078 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cep290Q6A078 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.6■□□□□ 0.73
Cep290Q6A078 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Gm7860-201ENSMUST00000121190 879 ntBASIC19.59■□□□□ 0.73
Cep290Q6A078 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Gm30025-201ENSMUST00000218555 728 ntBASIC19.59■□□□□ 0.73
Cep290Q6A078 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cep290Q6A078 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cep290Q6A078 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Cep290Q6A078 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cep290Q6A078 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cep290Q6A078 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cep290Q6A078 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Cep290Q6A078 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cep290Q6A078 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cep290Q6A078 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cep290Q6A078 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cep290Q6A078 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.58■□□□□ 0.72
Cep290Q6A078 Gm11539-201ENSMUST00000119837 557 ntBASIC19.58■□□□□ 0.72
Cep290Q6A078 Gm13436-201ENSMUST00000120418 567 ntBASIC19.58■□□□□ 0.72
Cep290Q6A078 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cep290Q6A078 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cep290Q6A078 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.57■□□□□ 0.72
Cep290Q6A078 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cep290Q6A078 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cep290Q6A078 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cep290Q6A078 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cep290Q6A078 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cep290Q6A078 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.56■□□□□ 0.72
Cep290Q6A078 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cep290Q6A078 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cep290Q6A078 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cep290Q6A078 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cep290Q6A078 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cep290Q6A078 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.55■□□□□ 0.72
Cep290Q6A078 Gm25925-201ENSMUST00000158314 306 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms