Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six3Q62233 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six3Q62233 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six3Q62233 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Six3Q62233 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six3Q62233 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.59■□□□□ 0.57
Six3Q62233 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Six3Q62233 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six3Q62233 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six3Q62233 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six3Q62233 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six3Q62233 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.59■□□□□ 0.57
Six3Q62233 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Six3Q62233 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six3Q62233 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.58■□□□□ 0.57
Six3Q62233 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six3Q62233 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six3Q62233 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Six3Q62233 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six3Q62233 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six3Q62233 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six3Q62233 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six3Q62233 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Six3Q62233 Mir7075-201ENSMUST00000184187 82 ntBASIC18.58■□□□□ 0.56
Six3Q62233 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six3Q62233 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Six3Q62233 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six3Q62233 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Six3Q62233 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Six3Q62233 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Six3Q62233 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Six3Q62233 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six3Q62233 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.56■□□□□ 0.56
Six3Q62233 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.56■□□□□ 0.56
Six3Q62233 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six3Q62233 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Six3Q62233 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Six3Q62233 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Six3Q62233 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Six3Q62233 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Six3Q62233 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six3Q62233 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.54■□□□□ 0.56
Six3Q62233 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.54■□□□□ 0.56
Six3Q62233 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.54■□□□□ 0.56
Six3Q62233 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.54■□□□□ 0.56
Six3Q62233 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Six3Q62233 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six3Q62233 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Six3Q62233 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Six3Q62233 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Smad6-203ENSMUST00000179458 273 ntBASIC18.53■□□□□ 0.56
Six3Q62233 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.53■□□□□ 0.56
Six3Q62233 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six3Q62233 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Six3Q62233 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six3Q62233 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms