Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxn1Q61575 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxn1Q61575 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.89■■□□□ 1.1
Foxn1Q61575 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Foxn1Q61575 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Foxn1Q61575 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Foxn1Q61575 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
Foxn1Q61575 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Foxn1Q61575 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.88■■□□□ 1.09
Foxn1Q61575 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxn1Q61575 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxn1Q61575 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxn1Q61575 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Foxn1Q61575 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Foxn1Q61575 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Foxn1Q61575 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.87■■□□□ 1.09
Foxn1Q61575 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Foxn1Q61575 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Foxn1Q61575 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.87■■□□□ 1.09
Foxn1Q61575 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Foxn1Q61575 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Foxn1Q61575 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Foxn1Q61575 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.86■■□□□ 1.09
Foxn1Q61575 Gm13158-201ENSMUST00000122007 736 ntBASIC21.86■■□□□ 1.09
Foxn1Q61575 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Foxn1Q61575 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.86■■□□□ 1.09
Foxn1Q61575 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Foxn1Q61575 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Foxn1Q61575 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Foxn1Q61575 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Foxn1Q61575 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxn1Q61575 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Foxn1Q61575 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxn1Q61575 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxn1Q61575 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxn1Q61575 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.85■■□□□ 1.09
Foxn1Q61575 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxn1Q61575 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxn1Q61575 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxn1Q61575 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.84■■□□□ 1.09
Foxn1Q61575 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.84■■□□□ 1.09
Foxn1Q61575 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Foxn1Q61575 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Foxn1Q61575 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.84■■□□□ 1.09
Foxn1Q61575 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Foxn1Q61575 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.84■■□□□ 1.09
Foxn1Q61575 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Foxn1Q61575 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Foxn1Q61575 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Foxn1Q61575 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Foxn1Q61575 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Foxn1Q61575 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Foxn1Q61575 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.83■■□□□ 1.09
Foxn1Q61575 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Foxn1Q61575 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Foxn1Q61575 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Foxn1Q61575 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Foxn1Q61575 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Foxn1Q61575 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Foxn1Q61575 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.83■■□□□ 1.08
Foxn1Q61575 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.82■■□□□ 1.08
Foxn1Q61575 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.82■■□□□ 1.08
Foxn1Q61575 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.82■■□□□ 1.08
Foxn1Q61575 Gm6659-201ENSMUST00000174752 547 ntBASIC21.82■■□□□ 1.08
Foxn1Q61575 Gm10517-202ENSMUST00000192970 758 ntBASIC21.82■■□□□ 1.08
Foxn1Q61575 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.82■■□□□ 1.08
Foxn1Q61575 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Foxn1Q61575 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Foxn1Q61575 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Foxn1Q61575 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxn1Q61575 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Foxn1Q61575 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.81■■□□□ 1.08
Foxn1Q61575 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Foxn1Q61575 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.81■■□□□ 1.08
Foxn1Q61575 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxn1Q61575 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxn1Q61575 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxn1Q61575 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Foxn1Q61575 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxn1Q61575 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxn1Q61575 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxn1Q61575 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Foxn1Q61575 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxn1Q61575 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxn1Q61575 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Foxn1Q61575 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms