Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.89□□□□□ -0.19
Foxc1Q61572 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.89□□□□□ -0.19
Foxc1Q61572 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Foxc1Q61572 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Foxc1Q61572 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.88□□□□□ -0.19
Foxc1Q61572 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.88□□□□□ -0.19
Foxc1Q61572 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.88□□□□□ -0.19
Foxc1Q61572 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.88□□□□□ -0.19
Foxc1Q61572 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Foxc1Q61572 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxc1Q61572 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxc1Q61572 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxc1Q61572 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Foxc1Q61572 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxc1Q61572 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxc1Q61572 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Foxc1Q61572 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxc1Q61572 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxc1Q61572 AA386476-201ENSMUST00000098781 1665 ntBASIC13.87□□□□□ -0.19
Foxc1Q61572 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxc1Q61572 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxc1Q61572 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxc1Q61572 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxc1Q61572 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxc1Q61572 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.87□□□□□ -0.19
Foxc1Q61572 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.86□□□□□ -0.19
Foxc1Q61572 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.86□□□□□ -0.19
Foxc1Q61572 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Foxc1Q61572 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Foxc1Q61572 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Foxc1Q61572 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.86□□□□□ -0.19
Foxc1Q61572 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.86□□□□□ -0.19
Foxc1Q61572 Gm7291-201ENSMUST00000199147 382 ntBASIC13.86□□□□□ -0.19
Foxc1Q61572 Gm18671-201ENSMUST00000214826 683 ntBASIC13.86□□□□□ -0.19
Foxc1Q61572 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Foxc1Q61572 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxc1Q61572 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Foxc1Q61572 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Foxc1Q61572 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Foxc1Q61572 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.85□□□□□ -0.19
Foxc1Q61572 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.85□□□□□ -0.19
Foxc1Q61572 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxc1Q61572 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxc1Q61572 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxc1Q61572 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxc1Q61572 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Foxc1Q61572 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxc1Q61572 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Gm27801-201ENSMUST00000184174 223 ntBASIC13.84□□□□□ -0.19
Foxc1Q61572 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Gm42642-201ENSMUST00000200683 355 ntBASIC13.84□□□□□ -0.19
Foxc1Q61572 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Foxc1Q61572 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxc1Q61572 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.83□□□□□ -0.19
Foxc1Q61572 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms