Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cd53Q61451 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Cd53Q61451 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd53Q61451 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cd53Q61451 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd53Q61451 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd53Q61451 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cd53Q61451 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd53Q61451 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd53Q61451 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd53Q61451 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cd53Q61451 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd53Q61451 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cd53Q61451 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cd53Q61451 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cd53Q61451 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Cd53Q61451 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd53Q61451 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.47■□□□□ 0.39
Cd53Q61451 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cd53Q61451 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.47■□□□□ 0.39
Cd53Q61451 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cd53Q61451 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd53Q61451 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd53Q61451 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.46■□□□□ 0.39
Cd53Q61451 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
Cd53Q61451 Gm8493-201ENSMUST00000196881 489 ntBASIC17.46■□□□□ 0.39
Cd53Q61451 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.46■□□□□ 0.39
Cd53Q61451 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd53Q61451 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cd53Q61451 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.45■□□□□ 0.38
Cd53Q61451 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cd53Q61451 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cd53Q61451 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.45■□□□□ 0.38
Cd53Q61451 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd53Q61451 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.45■□□□□ 0.38
Cd53Q61451 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cd53Q61451 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cd53Q61451 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cd53Q61451 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.44■□□□□ 0.38
Cd53Q61451 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd53Q61451 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.43■□□□□ 0.38
Cd53Q61451 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd53Q61451 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd53Q61451 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd53Q61451 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms