Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sdf4Q61112 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Sdf4Q61112 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sdf4Q61112 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sdf4Q61112 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Sdf4Q61112 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.31■□□□□ 0.68
Sdf4Q61112 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sdf4Q61112 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 Golph3-202ENSMUST00000226517 2359 ntBASIC19.31■□□□□ 0.68
Sdf4Q61112 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.31■□□□□ 0.68
Sdf4Q61112 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.31■□□□□ 0.68
Sdf4Q61112 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sdf4Q61112 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sdf4Q61112 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdf4Q61112 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sdf4Q61112 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sdf4Q61112 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdf4Q61112 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
Sdf4Q61112 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdf4Q61112 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.29■□□□□ 0.68
Sdf4Q61112 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdf4Q61112 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sdf4Q61112 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sdf4Q61112 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.29■□□□□ 0.68
Sdf4Q61112 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sdf4Q61112 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdf4Q61112 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdf4Q61112 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sdf4Q61112 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Sdf4Q61112 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.28■□□□□ 0.68
Sdf4Q61112 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sdf4Q61112 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdf4Q61112 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sdf4Q61112 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sdf4Q61112 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sdf4Q61112 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sdf4Q61112 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sdf4Q61112 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdf4Q61112 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdf4Q61112 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.27■□□□□ 0.68
Sdf4Q61112 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.27■□□□□ 0.68
Sdf4Q61112 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdf4Q61112 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdf4Q61112 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.27■□□□□ 0.67
Sdf4Q61112 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdf4Q61112 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sdf4Q61112 Gm7860-201ENSMUST00000121190 879 ntBASIC19.26■□□□□ 0.67
Sdf4Q61112 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdf4Q61112 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.26■□□□□ 0.67
Sdf4Q61112 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdf4Q61112 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.26■□□□□ 0.67
Sdf4Q61112 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sdf4Q61112 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdf4Q61112 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdf4Q61112 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.26■□□□□ 0.67
Sdf4Q61112 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sdf4Q61112 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.25■□□□□ 0.67
Sdf4Q61112 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sdf4Q61112 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.24■□□□□ 0.67
Sdf4Q61112 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.24■□□□□ 0.67
Sdf4Q61112 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Sdf4Q61112 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms