Protein–RNA interactions for Protein: Q5YD48

A1cf, APOBEC1 complementation factor, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1cfQ5YD48 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
A1cfQ5YD48 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
A1cfQ5YD48 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
A1cfQ5YD48 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.28■■□□□ 1
A1cfQ5YD48 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
A1cfQ5YD48 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.28■■□□□ 1
A1cfQ5YD48 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
A1cfQ5YD48 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
A1cfQ5YD48 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.28■■□□□ 1
A1cfQ5YD48 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.28■■□□□ 1
A1cfQ5YD48 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
A1cfQ5YD48 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
A1cfQ5YD48 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.28■■□□□ 1
A1cfQ5YD48 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A1cfQ5YD48 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
A1cfQ5YD48 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.27■■□□□ 1
A1cfQ5YD48 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.27■■□□□ 1
A1cfQ5YD48 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.27■■□□□ 1
A1cfQ5YD48 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.27■■□□□ 1
A1cfQ5YD48 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.27■■□□□ 1
A1cfQ5YD48 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.27■□□□□ 0.99
A1cfQ5YD48 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
A1cfQ5YD48 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1cfQ5YD48 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1cfQ5YD48 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.26■□□□□ 0.99
A1cfQ5YD48 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1cfQ5YD48 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
A1cfQ5YD48 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1cfQ5YD48 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.25■□□□□ 0.99
A1cfQ5YD48 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1cfQ5YD48 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
A1cfQ5YD48 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
A1cfQ5YD48 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A1cfQ5YD48 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A1cfQ5YD48 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A1cfQ5YD48 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
A1cfQ5YD48 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.23■□□□□ 0.99
A1cfQ5YD48 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.23■□□□□ 0.99
A1cfQ5YD48 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.23■□□□□ 0.99
A1cfQ5YD48 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A1cfQ5YD48 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
A1cfQ5YD48 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.22■□□□□ 0.99
A1cfQ5YD48 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Golph3-202ENSMUST00000226517 2359 ntBASIC21.22■□□□□ 0.99
A1cfQ5YD48 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Gm20760-201ENSMUST00000179197 648 ntBASIC21.22■□□□□ 0.99
A1cfQ5YD48 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
A1cfQ5YD48 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.22■□□□□ 0.99
A1cfQ5YD48 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
A1cfQ5YD48 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Gm20049-201ENSMUST00000219950 730 ntBASIC21.21■□□□□ 0.99
A1cfQ5YD48 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
A1cfQ5YD48 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms