Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.8■□□□□ 0.28
Lrrk2Q5S006 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrk2Q5S006 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrk2Q5S006 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrk2Q5S006 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lrrk2Q5S006 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrk2Q5S006 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrk2Q5S006 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Gm7860-201ENSMUST00000121190 879 ntBASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.78■□□□□ 0.28
Lrrk2Q5S006 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrk2Q5S006 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrk2Q5S006 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.77■□□□□ 0.28
Lrrk2Q5S006 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lrrk2Q5S006 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.77■□□□□ 0.28
Lrrk2Q5S006 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrk2Q5S006 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrrk2Q5S006 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrrk2Q5S006 Gm44771-201ENSMUST00000206975 626 ntBASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrrk2Q5S006 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm23634-201ENSMUST00000175071 91 ntBASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm13559-201ENSMUST00000120476 863 ntBASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm21814-202ENSMUST00000203277 873 ntBASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrrk2Q5S006 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Gm30025-201ENSMUST00000218555 728 ntBASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Odf3b-204ENSMUST00000227834 930 ntBASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrk2Q5S006 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Gm10013-201ENSMUST00000106074 672 ntBASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Gm17971-201ENSMUST00000190239 806 ntBASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrk2Q5S006 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrk2Q5S006 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lrrk2Q5S006 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrk2Q5S006 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms