Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Gm13168-201ENSMUST00000121771 632 ntBASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Rab3c-203ENSMUST00000224180 967 ntBASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-2Q5R1I4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-2Q5R1I4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Gm26524-201ENSMUST00000192339 390 ntBASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-2Q5R1I4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-2Q5R1I4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Gm37856-201ENSMUST00000191634 999 ntBASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms