Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7d-3Q5R1I1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7d-3Q5R1I1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav7d-3Q5R1I1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav7d-3Q5R1I1 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Gm9847-201ENSMUST00000052528 599 ntBASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.92□□□□□ -0.18
Trav7d-3Q5R1I1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7d-3Q5R1I1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms