Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-4Q5R1H9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-4Q5R1H9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-4Q5R1H9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-4Q5R1H9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-4Q5R1H9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-4Q5R1H9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-4Q5R1H9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-4Q5R1H9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-4Q5R1H9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-4Q5R1H9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-4Q5R1H9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-4Q5R1H9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms