Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rnf20Q5DTM8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf20Q5DTM8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf20Q5DTM8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf20Q5DTM8 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf20Q5DTM8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Gm7860-201ENSMUST00000121190 879 ntBASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf20Q5DTM8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf20Q5DTM8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf20Q5DTM8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.58■■□□□ 1.2
Rnf20Q5DTM8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rnf20Q5DTM8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Rnf20Q5DTM8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.57■■□□□ 1.2
Rnf20Q5DTM8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms