Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc9Q3V038 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc9Q3V038 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.35■□□□□ 0.85
Ttc9Q3V038 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ttc9Q3V038 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Gm13168-201ENSMUST00000121771 632 ntBASIC20.34■□□□□ 0.85
Ttc9Q3V038 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ttc9Q3V038 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc9Q3V038 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.34■□□□□ 0.85
Ttc9Q3V038 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc9Q3V038 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.33■□□□□ 0.85
Ttc9Q3V038 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Gm7514-201ENSMUST00000209475 934 ntBASIC20.33■□□□□ 0.85
Ttc9Q3V038 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc9Q3V038 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ttc9Q3V038 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ttc9Q3V038 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Ttc9Q3V038 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ttc9Q3V038 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ttc9Q3V038 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc9Q3V038 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc9Q3V038 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc9Q3V038 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc9Q3V038 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ttc9Q3V038 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.32■□□□□ 0.84
Ttc9Q3V038 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc9Q3V038 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ttc9Q3V038 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.32■□□□□ 0.84
Ttc9Q3V038 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ttc9Q3V038 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.31■□□□□ 0.84
Ttc9Q3V038 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.31■□□□□ 0.84
Ttc9Q3V038 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.31■□□□□ 0.84
Ttc9Q3V038 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.31■□□□□ 0.84
Ttc9Q3V038 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc9Q3V038 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc9Q3V038 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc9Q3V038 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc9Q3V038 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc9Q3V038 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc9Q3V038 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Ttc9Q3V038 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ttc9Q3V038 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc9Q3V038 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc9Q3V038 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms