Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf223Q3UV31 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf223Q3UV31 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
Rnf223Q3UV31 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf223Q3UV31 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.51■□□□□ 0.55
Rnf223Q3UV31 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf223Q3UV31 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Gm13148-201ENSMUST00000118892 745 ntBASIC18.5■□□□□ 0.55
Rnf223Q3UV31 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf223Q3UV31 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf223Q3UV31 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Gm7290-201ENSMUST00000104990 617 ntBASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Gm12918-201ENSMUST00000120234 636 ntBASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Gm15710-201ENSMUST00000121821 636 ntBASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Gm5075-201ENSMUST00000196916 622 ntBASIC18.48■□□□□ 0.55
Rnf223Q3UV31 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf223Q3UV31 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf223Q3UV31 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms