Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nlrc4Q3UP24 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nlrc4Q3UP24 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nlrc4Q3UP24 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nlrc4Q3UP24 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nlrc4Q3UP24 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nlrc4Q3UP24 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nlrc4Q3UP24 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nlrc4Q3UP24 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nlrc4Q3UP24 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Nlrc4Q3UP24 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nlrc4Q3UP24 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nlrc4Q3UP24 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nlrc4Q3UP24 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nlrc4Q3UP24 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nlrc4Q3UP24 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.08■□□□□ 0.81
Nlrc4Q3UP24 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.08■□□□□ 0.81
Nlrc4Q3UP24 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nlrc4Q3UP24 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.08■□□□□ 0.8
Nlrc4Q3UP24 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nlrc4Q3UP24 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Nlrc4Q3UP24 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Nlrc4Q3UP24 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nlrc4Q3UP24 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Nlrc4Q3UP24 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.07■□□□□ 0.8
Nlrc4Q3UP24 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nlrc4Q3UP24 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nlrc4Q3UP24 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Gm42569-201ENSMUST00000200539 472 ntBASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nlrc4Q3UP24 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nlrc4Q3UP24 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nlrc4Q3UP24 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Gm13534-201ENSMUST00000121169 513 ntBASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nlrc4Q3UP24 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nlrc4Q3UP24 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nlrc4Q3UP24 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Nlrc4Q3UP24 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.02■□□□□ 0.79
Nlrc4Q3UP24 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nlrc4Q3UP24 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nlrc4Q3UP24 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms