Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnrc6aQ3UHK8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnrc6aQ3UHK8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnrc6aQ3UHK8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.77■□□□□ 0.44
Tnrc6aQ3UHK8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnrc6aQ3UHK8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tnrc6aQ3UHK8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tnrc6aQ3UHK8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnrc6aQ3UHK8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnrc6aQ3UHK8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tnrc6aQ3UHK8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tnrc6aQ3UHK8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnrc6aQ3UHK8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnrc6aQ3UHK8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.76■□□□□ 0.43
Tnrc6aQ3UHK8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnrc6aQ3UHK8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnrc6aQ3UHK8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnrc6aQ3UHK8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.74■□□□□ 0.43
Tnrc6aQ3UHK8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Gm10812-201ENSMUST00000099864 546 ntBASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnrc6aQ3UHK8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnrc6aQ3UHK8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnrc6aQ3UHK8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnrc6aQ3UHK8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnrc6aQ3UHK8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnrc6aQ3UHK8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnrc6aQ3UHK8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.71■□□□□ 0.43
Tnrc6aQ3UHK8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc6aQ3UHK8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms