Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.19■□□□□ 0.18
Sdk1Q3UH53 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 AA386476-201ENSMUST00000098781 1665 ntBASIC16.18■□□□□ 0.18
Sdk1Q3UH53 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.18■□□□□ 0.18
Sdk1Q3UH53 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.18■□□□□ 0.18
Sdk1Q3UH53 Gm18666-201ENSMUST00000190039 958 ntBASIC16.18■□□□□ 0.18
Sdk1Q3UH53 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdk1Q3UH53 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Gm7860-201ENSMUST00000121190 879 ntBASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Gm13158-201ENSMUST00000122007 736 ntBASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Gm27741-201ENSMUST00000185060 237 ntBASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Gm21362-201ENSMUST00000194272 928 ntBASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdk1Q3UH53 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Gm44549-201ENSMUST00000208351 577 ntBASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdk1Q3UH53 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Gm2399-201ENSMUST00000104944 225 ntBASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.15■□□□□ 0.18
Sdk1Q3UH53 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.14■□□□□ 0.17
Sdk1Q3UH53 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sdk1Q3UH53 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sdk1Q3UH53 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.13■□□□□ 0.17
Sdk1Q3UH53 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sdk1Q3UH53 Gm5417-201ENSMUST00000079706 384 ntBASIC16.13■□□□□ 0.17
Sdk1Q3UH53 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms