Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.19■□□□□ 0.18
Cln6Q3U466 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cln6Q3U466 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cln6Q3U466 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cln6Q3U466 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cln6Q3U466 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cln6Q3U466 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cln6Q3U466 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cln6Q3U466 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Gm22238-201ENSMUST00000175222 88 ntBASIC16.17■□□□□ 0.18
Cln6Q3U466 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.17■□□□□ 0.18
Cln6Q3U466 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cln6Q3U466 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Cln6Q3U466 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cln6Q3U466 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cln6Q3U466 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cln6Q3U466 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.16■□□□□ 0.18
Cln6Q3U466 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cln6Q3U466 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cln6Q3U466 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cln6Q3U466 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.15■□□□□ 0.18
Cln6Q3U466 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cln6Q3U466 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cln6Q3U466 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cln6Q3U466 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cln6Q3U466 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.15■□□□□ 0.18
Cln6Q3U466 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cln6Q3U466 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.14■□□□□ 0.17
Cln6Q3U466 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.14■□□□□ 0.17
Cln6Q3U466 Gm9959-201ENSMUST00000068277 390 ntBASIC16.14■□□□□ 0.17
Cln6Q3U466 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.14■□□□□ 0.17
Cln6Q3U466 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
Cln6Q3U466 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cln6Q3U466 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.14■□□□□ 0.17
Cln6Q3U466 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cln6Q3U466 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cln6Q3U466 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Cln6Q3U466 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.13■□□□□ 0.17
Cln6Q3U466 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.13■□□□□ 0.17
Cln6Q3U466 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.13■□□□□ 0.17
Cln6Q3U466 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.13■□□□□ 0.17
Cln6Q3U466 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cln6Q3U466 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Cln6Q3U466 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.13■□□□□ 0.17
Cln6Q3U466 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cln6Q3U466 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln6Q3U466 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln6Q3U466 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln6Q3U466 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.12■□□□□ 0.17
Cln6Q3U466 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cln6Q3U466 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms