Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Gm27801-201ENSMUST00000184174 223 ntBASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Gm27011-201ENSMUST00000182352 972 ntBASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Khdc4Q3TCX3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Khdc4Q3TCX3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Khdc4Q3TCX3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.08■□□□□ 0.48
Khdc4Q3TCX3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Khdc4Q3TCX3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc4Q3TCX3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc4Q3TCX3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc4Q3TCX3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc4Q3TCX3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc4Q3TCX3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc4Q3TCX3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Khdc4Q3TCX3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Khdc4Q3TCX3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms