Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl9Q32KG4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl9Q32KG4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.17■□□□□ 0.82
Rtl9Q32KG4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.17■□□□□ 0.82
Rtl9Q32KG4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rtl9Q32KG4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl9Q32KG4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtl9Q32KG4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rtl9Q32KG4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtl9Q32KG4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtl9Q32KG4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl9Q32KG4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.15■□□□□ 0.82
Rtl9Q32KG4 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.15■□□□□ 0.82
Rtl9Q32KG4 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.15■□□□□ 0.82
Rtl9Q32KG4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl9Q32KG4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.15■□□□□ 0.82
Rtl9Q32KG4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Rtl9Q32KG4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl9Q32KG4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rtl9Q32KG4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl9Q32KG4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtl9Q32KG4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
Rtl9Q32KG4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 Gm12933-201ENSMUST00000120203 872 ntBASIC20.11■□□□□ 0.81
Rtl9Q32KG4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl9Q32KG4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl9Q32KG4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl9Q32KG4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.1■□□□□ 0.81
Rtl9Q32KG4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.1■□□□□ 0.81
Rtl9Q32KG4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl9Q32KG4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.1■□□□□ 0.81
Rtl9Q32KG4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Rtl9Q32KG4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Gm7514-201ENSMUST00000209475 934 ntBASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl9Q32KG4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl9Q32KG4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl9Q32KG4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl9Q32KG4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms