Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.91■□□□□ 0.46
Nkx3-2P97503 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Nkx3-2P97503 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nkx3-2P97503 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.89■□□□□ 0.46
Nkx3-2P97503 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.89■□□□□ 0.45
Nkx3-2P97503 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.89■□□□□ 0.45
Nkx3-2P97503 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx3-2P97503 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Gm7514-201ENSMUST00000209475 934 ntBASIC17.88■□□□□ 0.45
Nkx3-2P97503 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.88■□□□□ 0.45
Nkx3-2P97503 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.88■□□□□ 0.45
Nkx3-2P97503 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx3-2P97503 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nkx3-2P97503 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.86■□□□□ 0.45
Nkx3-2P97503 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.86■□□□□ 0.45
Nkx3-2P97503 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms