Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh6P97326 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh6P97326 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh6P97326 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh6P97326 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh6P97326 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.32■□□□□ 0.68
Cdh6P97326 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Cdh6P97326 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh6P97326 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdh6P97326 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh6P97326 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.31■□□□□ 0.68
Cdh6P97326 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh6P97326 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh6P97326 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh6P97326 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdh6P97326 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdh6P97326 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh6P97326 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdh6P97326 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh6P97326 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh6P97326 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh6P97326 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
Cdh6P97326 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh6P97326 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh6P97326 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cdh6P97326 Gm38205-201ENSMUST00000192243 258 ntBASIC19.29■□□□□ 0.68
Cdh6P97326 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.29■□□□□ 0.68
Cdh6P97326 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.29■□□□□ 0.68
Cdh6P97326 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.29■□□□□ 0.68
Cdh6P97326 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cdh6P97326 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Cdh6P97326 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cdh6P97326 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cdh6P97326 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh6P97326 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh6P97326 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh6P97326 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh6P97326 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cdh6P97326 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.28■□□□□ 0.68
Cdh6P97326 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdh6P97326 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.28■□□□□ 0.68
Cdh6P97326 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdh6P97326 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh6P97326 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Cdh6P97326 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh6P97326 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Cdh6P97326 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.28■□□□□ 0.68
Cdh6P97326 Reep4-203ENSMUST00000226563 1444 ntBASIC19.27■□□□□ 0.68
Cdh6P97326 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh6P97326 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh6P97326 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh6P97326 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cdh6P97326 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh6P97326 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh6P97326 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh6P97326 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh6P97326 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh6P97326 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cdh6P97326 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.26■□□□□ 0.67
Cdh6P97326 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdh6P97326 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh6P97326 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.25■□□□□ 0.67
Cdh6P97326 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cdh6P97326 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Cdh6P97326 Gm42778-201ENSMUST00000199644 553 ntBASIC19.25■□□□□ 0.67
Cdh6P97326 Gm5874-201ENSMUST00000096101 508 ntBASIC19.25■□□□□ 0.67
Cdh6P97326 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh6P97326 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Cdh6P97326 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh6P97326 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cdh6P97326 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh6P97326 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh6P97326 Gm13234-201ENSMUST00000120010 747 ntBASIC19.24■□□□□ 0.67
Cdh6P97326 Gm18284-201ENSMUST00000172604 624 ntBASIC19.24■□□□□ 0.67
Cdh6P97326 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.24■□□□□ 0.67
Cdh6P97326 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.24■□□□□ 0.67
Cdh6P97326 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh6P97326 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh6P97326 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh6P97326 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Cdh6P97326 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh6P97326 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh6P97326 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms