Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43cP86449 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43cP86449 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim43cP86449 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.78■□□□□ 0.92
Trim43cP86449 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim43cP86449 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43cP86449 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Gm38205-201ENSMUST00000192243 258 ntBASIC20.77■□□□□ 0.92
Trim43cP86449 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Trim43cP86449 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim43cP86449 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43cP86449 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.77■□□□□ 0.91
Trim43cP86449 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim43cP86449 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim43cP86449 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim43cP86449 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim43cP86449 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim43cP86449 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim43cP86449 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim43cP86449 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim43cP86449 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.76■□□□□ 0.91
Trim43cP86449 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim43cP86449 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim43cP86449 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Trim43cP86449 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43cP86449 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim43cP86449 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim43cP86449 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 BC021767-201ENSMUST00000126387 1716 ntBASIC20.74■□□□□ 0.91
Trim43cP86449 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.74■□□□□ 0.91
Trim43cP86449 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim43cP86449 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim43cP86449 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim43cP86449 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43cP86449 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.73■□□□□ 0.91
Trim43cP86449 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43cP86449 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim43cP86449 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43cP86449 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43cP86449 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43cP86449 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43cP86449 Gm13146-201ENSMUST00000118508 780 ntBASIC20.73■□□□□ 0.91
Trim43cP86449 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Trim43cP86449 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim43cP86449 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43cP86449 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43cP86449 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.73■□□□□ 0.91
Trim43cP86449 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43cP86449 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43cP86449 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43cP86449 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim43cP86449 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43cP86449 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.72■□□□□ 0.91
Trim43cP86449 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.72■□□□□ 0.91
Trim43cP86449 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43cP86449 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim43cP86449 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43cP86449 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim43cP86449 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim43cP86449 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim43cP86449 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms