Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Six5P70178 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six5P70178 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six5P70178 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Six5P70178 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six5P70178 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.79■□□□□ 0.44
Six5P70178 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six5P70178 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six5P70178 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six5P70178 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six5P70178 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Six5P70178 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.78■□□□□ 0.44
Six5P70178 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six5P70178 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six5P70178 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Six5P70178 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six5P70178 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Six5P70178 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six5P70178 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Six5P70178 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six5P70178 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.77■□□□□ 0.44
Six5P70178 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six5P70178 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six5P70178 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six5P70178 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.77■□□□□ 0.44
Six5P70178 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six5P70178 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Six5P70178 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Six5P70178 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Six5P70178 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Six5P70178 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.77■□□□□ 0.43
Six5P70178 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Six5P70178 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Six5P70178 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.76■□□□□ 0.43
Six5P70178 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.76■□□□□ 0.43
Six5P70178 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six5P70178 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six5P70178 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.75■□□□□ 0.43
Six5P70178 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six5P70178 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six5P70178 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six5P70178 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.75■□□□□ 0.43
Six5P70178 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.75■□□□□ 0.43
Six5P70178 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.75■□□□□ 0.43
Six5P70178 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six5P70178 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.75■□□□□ 0.43
Six5P70178 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six5P70178 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Six5P70178 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six5P70178 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Six5P70178 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Six5P70178 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.74■□□□□ 0.43
Six5P70178 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.74■□□□□ 0.43
Six5P70178 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.74■□□□□ 0.43
Six5P70178 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Six5P70178 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Six5P70178 Gm10493-201ENSMUST00000097270 612 ntBASIC17.74■□□□□ 0.43
Six5P70178 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.74■□□□□ 0.43
Six5P70178 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six5P70178 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.74■□□□□ 0.43
Six5P70178 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six5P70178 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six5P70178 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.73■□□□□ 0.43
Six5P70178 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.73■□□□□ 0.43
Six5P70178 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six5P70178 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six5P70178 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Six5P70178 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six5P70178 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Six5P70178 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.73■□□□□ 0.43
Six5P70178 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six5P70178 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six5P70178 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Six5P70178 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six5P70178 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six5P70178 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Six5P70178 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Six5P70178 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Six5P70178 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.72■□□□□ 0.43
Six5P70178 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.72■□□□□ 0.43
Six5P70178 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms