Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ThraP63058 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ThraP63058 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ThraP63058 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.18■□□□□ 0.66
ThraP63058 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ThraP63058 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ThraP63058 Gm10033-202ENSMUST00000211874 928 ntBASIC19.18■□□□□ 0.66
ThraP63058 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ThraP63058 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ThraP63058 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ThraP63058 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ThraP63058 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ThraP63058 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ThraP63058 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.17■□□□□ 0.66
ThraP63058 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ThraP63058 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
ThraP63058 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ThraP63058 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ThraP63058 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ThraP63058 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.16■□□□□ 0.66
ThraP63058 Gm37179-201ENSMUST00000194862 823 ntBASIC19.16■□□□□ 0.66
ThraP63058 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ThraP63058 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ThraP63058 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ThraP63058 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ThraP63058 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ThraP63058 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ThraP63058 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ThraP63058 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.15■□□□□ 0.66
ThraP63058 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.15■□□□□ 0.66
ThraP63058 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.15■□□□□ 0.66
ThraP63058 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ThraP63058 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ThraP63058 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ThraP63058 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ThraP63058 Golph3-205ENSMUST00000228671 2842 ntBASIC19.15■□□□□ 0.66
ThraP63058 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.14■□□□□ 0.65
ThraP63058 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
ThraP63058 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ThraP63058 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ThraP63058 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ThraP63058 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ThraP63058 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ThraP63058 AV356131-201ENSMUST00000206201 750 ntBASIC19.13■□□□□ 0.65
ThraP63058 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.13■□□□□ 0.65
ThraP63058 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ThraP63058 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ThraP63058 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ThraP63058 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ThraP63058 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ThraP63058 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ThraP63058 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.12■□□□□ 0.65
ThraP63058 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ThraP63058 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ThraP63058 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.12■□□□□ 0.65
ThraP63058 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.12■□□□□ 0.65
ThraP63058 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ThraP63058 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ThraP63058 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.11■□□□□ 0.65
ThraP63058 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ThraP63058 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ThraP63058 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.11■□□□□ 0.65
ThraP63058 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms