Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vamp3P63024 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vamp3P63024 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vamp3P63024 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vamp3P63024 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.72□□□□□ -0.05
Vamp3P63024 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vamp3P63024 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Vamp3P63024 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vamp3P63024 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vamp3P63024 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Vamp3P63024 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vamp3P63024 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vamp3P63024 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vamp3P63024 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vamp3P63024 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vamp3P63024 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Vamp3P63024 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.7□□□□□ -0.06
Vamp3P63024 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vamp3P63024 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vamp3P63024 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Vamp3P63024 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vamp3P63024 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Vamp3P63024 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.69□□□□□ -0.06
Vamp3P63024 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.69□□□□□ -0.06
Vamp3P63024 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.69□□□□□ -0.06
Vamp3P63024 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.69□□□□□ -0.06
Vamp3P63024 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vamp3P63024 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.68□□□□□ -0.06
Vamp3P63024 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vamp3P63024 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.68□□□□□ -0.06
Vamp3P63024 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.68□□□□□ -0.06
Vamp3P63024 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.68□□□□□ -0.06
Vamp3P63024 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.68□□□□□ -0.06
Vamp3P63024 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vamp3P63024 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vamp3P63024 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vamp3P63024 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vamp3P63024 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vamp3P63024 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vamp3P63024 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vamp3P63024 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vamp3P63024 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms