Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lsm6P62313 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lsm6P62313 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Lsm6P62313 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.66■□□□□ 0.26
Lsm6P62313 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lsm6P62313 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lsm6P62313 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.66■□□□□ 0.26
Lsm6P62313 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lsm6P62313 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Lsm6P62313 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.65■□□□□ 0.26
Lsm6P62313 Gm43060-201ENSMUST00000200621 289 ntBASIC16.65■□□□□ 0.26
Lsm6P62313 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.65■□□□□ 0.26
Lsm6P62313 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm6P62313 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 Gm7860-201ENSMUST00000121190 879 ntBASIC16.64■□□□□ 0.25
Lsm6P62313 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.64■□□□□ 0.25
Lsm6P62313 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Lsm6P62313 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.64■□□□□ 0.25
Lsm6P62313 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm6P62313 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.64■□□□□ 0.25
Lsm6P62313 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.63■□□□□ 0.25
Lsm6P62313 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Lsm6P62313 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.63■□□□□ 0.25
Lsm6P62313 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm6P62313 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Lsm6P62313 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lsm6P62313 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.62■□□□□ 0.25
Lsm6P62313 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.62■□□□□ 0.25
Lsm6P62313 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lsm6P62313 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm6P62313 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.61■□□□□ 0.25
Lsm6P62313 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lsm6P62313 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lsm6P62313 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Lsm6P62313 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.61■□□□□ 0.25
Lsm6P62313 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Lsm6P62313 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm6P62313 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lsm6P62313 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm6P62313 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms