Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab4aP56371 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab4aP56371 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab4aP56371 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab4aP56371 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.04■□□□□ -0
Rab4aP56371 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.04■□□□□ -0
Rab4aP56371 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Rab4aP56371 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.04■□□□□ -0
Rab4aP56371 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rab4aP56371 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab4aP56371 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rab4aP56371 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Rab4aP56371 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.03■□□□□ -0
Rab4aP56371 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab4aP56371 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.03■□□□□ -0
Rab4aP56371 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rab4aP56371 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab4aP56371 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.02■□□□□ -0
Rab4aP56371 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rab4aP56371 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab4aP56371 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab4aP56371 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Rab4aP56371 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.02■□□□□ -0
Rab4aP56371 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.02■□□□□ -0
Rab4aP56371 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab4aP56371 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab4aP56371 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.02□□□□□ -0.01
Rab4aP56371 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Rab4aP56371 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab4aP56371 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab4aP56371 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rab4aP56371 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab4aP56371 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rab4aP56371 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.02□□□□□ -0.01
Rab4aP56371 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab4aP56371 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.01□□□□□ -0.01
Rab4aP56371 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rab4aP56371 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rab4aP56371 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rab4aP56371 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rab4aP56371 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.01□□□□□ -0.01
Rab4aP56371 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rab4aP56371 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Gm15743-202ENSMUST00000182690 1901 ntBASIC15□□□□□ -0.01
Rab4aP56371 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Gm42918-201ENSMUST00000199249 1580 ntBASIC15□□□□□ -0.01
Rab4aP56371 Nsd1-206ENSMUST00000224918 1001 ntBASIC15□□□□□ -0.01
Rab4aP56371 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15□□□□□ -0.01
Rab4aP56371 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rab4aP56371 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rab4aP56371 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms