Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm38205-201ENSMUST00000192243 258 ntBASIC18.66■□□□□ 0.58
Limk1P53668 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Limk1P53668 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Limk1P53668 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Limk1P53668 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Limk1P53668 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Limk1P53668 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.65■□□□□ 0.58
Limk1P53668 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Limk1P53668 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.65■□□□□ 0.58
Limk1P53668 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Limk1P53668 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Limk1P53668 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Gm5643-201ENSMUST00000117081 966 ntBASIC18.64■□□□□ 0.57
Limk1P53668 Gm11643-201ENSMUST00000119578 864 ntBASIC18.64■□□□□ 0.57
Limk1P53668 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.64■□□□□ 0.57
Limk1P53668 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Limk1P53668 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Limk1P53668 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Limk1P53668 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Limk1P53668 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Limk1P53668 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Limk1P53668 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Limk1P53668 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.63■□□□□ 0.57
Limk1P53668 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Limk1P53668 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Limk1P53668 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Limk1P53668 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Limk1P53668 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk1P53668 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk1P53668 Gm715-201ENSMUST00000117865 831 ntBASIC18.62■□□□□ 0.57
Limk1P53668 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk1P53668 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Limk1P53668 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Limk1P53668 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk1P53668 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk1P53668 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk1P53668 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Limk1P53668 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Limk1P53668 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk1P53668 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk1P53668 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Limk1P53668 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Limk1P53668 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk1P53668 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk1P53668 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Limk1P53668 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk1P53668 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk1P53668 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk1P53668 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Limk1P53668 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.59■□□□□ 0.57
Limk1P53668 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk1P53668 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Limk1P53668 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.59■□□□□ 0.57
Limk1P53668 Gm27275-201ENSMUST00000184318 272 ntBASIC18.59■□□□□ 0.57
Limk1P53668 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Limk1P53668 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk1P53668 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk1P53668 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Limk1P53668 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Limk1P53668 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Limk1P53668 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Limk1P53668 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Limk1P53668 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.58■□□□□ 0.56
Limk1P53668 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.58■□□□□ 0.56
Limk1P53668 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk1P53668 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Limk1P53668 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk1P53668 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.58■□□□□ 0.56
Limk1P53668 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Limk1P53668 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk1P53668 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk1P53668 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk1P53668 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms