Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hnf4aP49698 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Hnf4aP49698 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hnf4aP49698 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hnf4aP49698 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hnf4aP49698 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hnf4aP49698 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hnf4aP49698 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hnf4aP49698 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hnf4aP49698 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.38■□□□□ 0.53
Hnf4aP49698 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.38■□□□□ 0.53
Hnf4aP49698 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Hnf4aP49698 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hnf4aP49698 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hnf4aP49698 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hnf4aP49698 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hnf4aP49698 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.37■□□□□ 0.53
Hnf4aP49698 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Hnf4aP49698 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Gm26833-201ENSMUST00000180899 440 ntBASIC18.37■□□□□ 0.53
Hnf4aP49698 Gm27801-201ENSMUST00000184174 223 ntBASIC18.37■□□□□ 0.53
Hnf4aP49698 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Hnf4aP49698 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hnf4aP49698 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hnf4aP49698 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hnf4aP49698 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hnf4aP49698 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hnf4aP49698 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hnf4aP49698 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hnf4aP49698 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hnf4aP49698 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hnf4aP49698 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hnf4aP49698 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.35■□□□□ 0.53
Hnf4aP49698 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Hnf4aP49698 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hnf4aP49698 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hnf4aP49698 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Gm43017-201ENSMUST00000198296 752 ntBASIC18.35■□□□□ 0.53
Hnf4aP49698 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hnf4aP49698 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.35■□□□□ 0.53
Hnf4aP49698 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hnf4aP49698 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Hnf4aP49698 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hnf4aP49698 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.34■□□□□ 0.53
Hnf4aP49698 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hnf4aP49698 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hnf4aP49698 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Hnf4aP49698 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hnf4aP49698 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hnf4aP49698 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.34■□□□□ 0.53
Hnf4aP49698 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
Hnf4aP49698 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Hnf4aP49698 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Hnf4aP49698 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Hnf4aP49698 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.33■□□□□ 0.52
Hnf4aP49698 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Hnf4aP49698 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.33■□□□□ 0.52
Hnf4aP49698 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hnf4aP49698 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hnf4aP49698 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hnf4aP49698 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.33■□□□□ 0.52
Hnf4aP49698 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms