Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Xcl1P47993 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.5□□□□□ -0.41
Xcl1P47993 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 BC021767-201ENSMUST00000126387 1716 ntBASIC12.5□□□□□ -0.41
Xcl1P47993 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.5□□□□□ -0.41
Xcl1P47993 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Xcl1P47993 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Xcl1P47993 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xcl1P47993 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.49□□□□□ -0.41
Xcl1P47993 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Xcl1P47993 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Xcl1P47993 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Xcl1P47993 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Xcl1P47993 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xcl1P47993 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC12.48□□□□□ -0.41
Xcl1P47993 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xcl1P47993 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.48□□□□□ -0.41
Xcl1P47993 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Xcl1P47993 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Xcl1P47993 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC12.47□□□□□ -0.41
Xcl1P47993 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xcl1P47993 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Xcl1P47993 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC12.46□□□□□ -0.41
Xcl1P47993 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Xcl1P47993 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 AC116713.1-201ENSMUST00000215074 430 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms