Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps4bP46467 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps4bP46467 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Vps4bP46467 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.26■□□□□ 0.67
Vps4bP46467 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4bP46467 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4bP46467 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4bP46467 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Vps4bP46467 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps4bP46467 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Vps4bP46467 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4bP46467 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.26■□□□□ 0.67
Vps4bP46467 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4bP46467 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4bP46467 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4bP46467 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.26■□□□□ 0.67
Vps4bP46467 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Vps4bP46467 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.25■□□□□ 0.67
Vps4bP46467 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Vps4bP46467 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4bP46467 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps4bP46467 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
Vps4bP46467 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps4bP46467 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4bP46467 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Vps4bP46467 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Golph3-205ENSMUST00000228671 2842 ntBASIC19.23■□□□□ 0.67
Vps4bP46467 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps4bP46467 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Vps4bP46467 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps4bP46467 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Vps4bP46467 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.23■□□□□ 0.67
Vps4bP46467 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vps4bP46467 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vps4bP46467 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4bP46467 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps4bP46467 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.22■□□□□ 0.67
Vps4bP46467 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vps4bP46467 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Vps4bP46467 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4bP46467 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.22■□□□□ 0.67
Vps4bP46467 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Vps4bP46467 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Vps4bP46467 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vps4bP46467 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.21■□□□□ 0.67
Vps4bP46467 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.21■□□□□ 0.67
Vps4bP46467 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps4bP46467 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms