Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HttP42859 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HttP42859 Gm21814-202ENSMUST00000203277 873 ntBASIC20.73■□□□□ 0.91
HttP42859 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HttP42859 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HttP42859 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HttP42859 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HttP42859 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HttP42859 Gm7860-201ENSMUST00000121190 879 ntBASIC20.73■□□□□ 0.91
HttP42859 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HttP42859 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HttP42859 Gm7889-201ENSMUST00000185591 958 ntBASIC20.72■□□□□ 0.91
HttP42859 Gm44549-201ENSMUST00000208351 577 ntBASIC20.72■□□□□ 0.91
HttP42859 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HttP42859 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.72■□□□□ 0.91
HttP42859 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.72■□□□□ 0.91
HttP42859 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HttP42859 Ank2-226ENSMUST00000189368 339 ntBASIC20.72■□□□□ 0.91
HttP42859 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.72■□□□□ 0.91
HttP42859 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HttP42859 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HttP42859 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HttP42859 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.71■□□□□ 0.91
HttP42859 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.71■□□□□ 0.91
HttP42859 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HttP42859 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HttP42859 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.71■□□□□ 0.91
HttP42859 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HttP42859 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HttP42859 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HttP42859 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HttP42859 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HttP42859 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.7■□□□□ 0.9
HttP42859 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HttP42859 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.69■□□□□ 0.9
HttP42859 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HttP42859 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HttP42859 Gm6345-202ENSMUST00000180900 204 ntBASIC20.69■□□□□ 0.9
HttP42859 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.68■□□□□ 0.9
HttP42859 Gm25925-201ENSMUST00000158314 306 ntBASIC20.68■□□□□ 0.9
HttP42859 Gm33142-201ENSMUST00000193913 867 ntBASIC20.68■□□□□ 0.9
HttP42859 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HttP42859 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.68■□□□□ 0.9
HttP42859 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HttP42859 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HttP42859 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HttP42859 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HttP42859 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HttP42859 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HttP42859 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.68■□□□□ 0.9
HttP42859 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HttP42859 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HttP42859 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HttP42859 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HttP42859 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
HttP42859 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.66■□□□□ 0.9
HttP42859 Gm11539-201ENSMUST00000119837 557 ntBASIC20.66■□□□□ 0.9
HttP42859 Gm13436-201ENSMUST00000120418 567 ntBASIC20.66■□□□□ 0.9
HttP42859 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.66■□□□□ 0.9
HttP42859 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HttP42859 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.65■□□□□ 0.9
HttP42859 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HttP42859 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
HttP42859 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HttP42859 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.65■□□□□ 0.9
HttP42859 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HttP42859 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HttP42859 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HttP42859 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HttP42859 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HttP42859 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HttP42859 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
HttP42859 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HttP42859 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.64■□□□□ 0.89
HttP42859 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HttP42859 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms