Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Abca1P41233 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.74■□□□□ 0.11
Abca1P41233 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Abca1P41233 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.73■□□□□ 0.11
Abca1P41233 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Abca1P41233 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Abca1P41233 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Abca1P41233 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca1P41233 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca1P41233 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca1P41233 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca1P41233 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.72■□□□□ 0.11
Abca1P41233 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca1P41233 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Abca1P41233 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Abca1P41233 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Abca1P41233 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Abca1P41233 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca1P41233 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Abca1P41233 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Abca1P41233 Gm6420-201ENSMUST00000193885 723 ntBASIC15.71■□□□□ 0.11
Abca1P41233 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.71■□□□□ 0.11
Abca1P41233 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Abca1P41233 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca1P41233 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca1P41233 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca1P41233 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.71■□□□□ 0.11
Abca1P41233 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Abca1P41233 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Abca1P41233 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.71■□□□□ 0.11
Abca1P41233 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Abca1P41233 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca1P41233 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Abca1P41233 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Abca1P41233 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Abca1P41233 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Abca1P41233 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.7■□□□□ 0.1
Abca1P41233 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.7■□□□□ 0.1
Abca1P41233 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Abca1P41233 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca1P41233 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Abca1P41233 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Abca1P41233 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Gm13534-201ENSMUST00000121169 513 ntBASIC15.69■□□□□ 0.1
Abca1P41233 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.69■□□□□ 0.1
Abca1P41233 Gm22325-201ENSMUST00000158904 308 ntBASIC15.69■□□□□ 0.1
Abca1P41233 Gm26524-201ENSMUST00000192339 390 ntBASIC15.69■□□□□ 0.1
Abca1P41233 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.69■□□□□ 0.1
Abca1P41233 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.69■□□□□ 0.1
Abca1P41233 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca1P41233 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Abca1P41233 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Abca1P41233 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.68■□□□□ 0.1
Abca1P41233 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.68■□□□□ 0.1
Abca1P41233 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Gm10812-201ENSMUST00000099864 546 ntBASIC15.68■□□□□ 0.1
Abca1P41233 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Abca1P41233 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca1P41233 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.68■□□□□ 0.1
Abca1P41233 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms