Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd9P40240 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd9P40240 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cd9P40240 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd9P40240 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd9P40240 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.88■□□□□ 0.61
Cd9P40240 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cd9P40240 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd9P40240 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd9P40240 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.87■□□□□ 0.61
Cd9P40240 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd9P40240 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.86■□□□□ 0.61
Cd9P40240 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd9P40240 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd9P40240 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd9P40240 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd9P40240 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.86■□□□□ 0.61
Cd9P40240 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd9P40240 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd9P40240 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cd9P40240 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.85■□□□□ 0.61
Cd9P40240 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd9P40240 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd9P40240 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd9P40240 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.85■□□□□ 0.61
Cd9P40240 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd9P40240 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd9P40240 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd9P40240 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd9P40240 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Cd9P40240 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd9P40240 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd9P40240 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cd9P40240 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd9P40240 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd9P40240 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cd9P40240 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd9P40240 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd9P40240 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd9P40240 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd9P40240 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cd9P40240 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cd9P40240 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Cd9P40240 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd9P40240 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cd9P40240 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.83■□□□□ 0.6
Cd9P40240 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd9P40240 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd9P40240 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cd9P40240 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.83■□□□□ 0.6
Cd9P40240 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd9P40240 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd9P40240 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cd9P40240 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cd9P40240 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd9P40240 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.81■□□□□ 0.6
Cd9P40240 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.81■□□□□ 0.6
Cd9P40240 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.81■□□□□ 0.6
Cd9P40240 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.81■□□□□ 0.6
Cd9P40240 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cd9P40240 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.81■□□□□ 0.6
Cd9P40240 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Cd9P40240 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cd9P40240 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd9P40240 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Cd9P40240 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cd9P40240 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms