Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Reep4-203ENSMUST00000226563 1444 ntBASIC18.2■□□□□ 0.5
Cdh4P39038 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh4P39038 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh4P39038 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh4P39038 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Cdh4P39038 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh4P39038 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh4P39038 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh4P39038 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdh4P39038 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdh4P39038 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh4P39038 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdh4P39038 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.18■□□□□ 0.5
Cdh4P39038 Gm18671-201ENSMUST00000214826 683 ntBASIC18.18■□□□□ 0.5
Cdh4P39038 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cdh4P39038 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 Golph3-202ENSMUST00000226517 2359 ntBASIC18.18■□□□□ 0.5
Cdh4P39038 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh4P39038 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh4P39038 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh4P39038 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdh4P39038 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh4P39038 Gm13234-201ENSMUST00000120010 747 ntBASIC18.17■□□□□ 0.5
Cdh4P39038 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh4P39038 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh4P39038 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh4P39038 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh4P39038 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.17■□□□□ 0.5
Cdh4P39038 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdh4P39038 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdh4P39038 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Cdh4P39038 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Cdh4P39038 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdh4P39038 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdh4P39038 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdh4P39038 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh4P39038 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.15■□□□□ 0.5
Cdh4P39038 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh4P39038 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh4P39038 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Cdh4P39038 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.15■□□□□ 0.5
Cdh4P39038 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Cdh4P39038 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh4P39038 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh4P39038 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh4P39038 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh4P39038 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh4P39038 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh4P39038 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdh4P39038 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Gm7860-201ENSMUST00000121190 879 ntBASIC18.14■□□□□ 0.49
Cdh4P39038 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdh4P39038 Gm10033-202ENSMUST00000211874 928 ntBASIC18.14■□□□□ 0.49
Cdh4P39038 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.14■□□□□ 0.49
Cdh4P39038 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh4P39038 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Cdh4P39038 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cdh4P39038 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh4P39038 Gm38205-201ENSMUST00000192243 258 ntBASIC18.13■□□□□ 0.49
Cdh4P39038 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Cdh4P39038 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh4P39038 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh4P39038 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh4P39038 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh4P39038 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh4P39038 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh4P39038 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.12■□□□□ 0.49
Cdh4P39038 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh4P39038 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh4P39038 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh4P39038 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms