Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Upk2P38575 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Upk2P38575 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk2P38575 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk2P38575 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk2P38575 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Gm7860-201ENSMUST00000121190 879 ntBASIC16.71■□□□□ 0.27
Upk2P38575 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.71■□□□□ 0.27
Upk2P38575 Gm43060-201ENSMUST00000200621 289 ntBASIC16.71■□□□□ 0.27
Upk2P38575 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Upk2P38575 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk2P38575 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upk2P38575 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.7■□□□□ 0.26
Upk2P38575 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.7■□□□□ 0.26
Upk2P38575 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.7■□□□□ 0.26
Upk2P38575 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Upk2P38575 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.7■□□□□ 0.26
Upk2P38575 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Upk2P38575 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Upk2P38575 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk2P38575 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk2P38575 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk2P38575 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk2P38575 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk2P38575 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.69■□□□□ 0.26
Upk2P38575 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk2P38575 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk2P38575 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Upk2P38575 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk2P38575 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.69■□□□□ 0.26
Upk2P38575 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Upk2P38575 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Upk2P38575 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Upk2P38575 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk2P38575 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Upk2P38575 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Upk2P38575 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.68■□□□□ 0.26
Upk2P38575 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.68■□□□□ 0.26
Upk2P38575 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upk2P38575 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk2P38575 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upk2P38575 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk2P38575 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upk2P38575 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk2P38575 BC021767-201ENSMUST00000126387 1716 ntBASIC16.67■□□□□ 0.26
Upk2P38575 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.67■□□□□ 0.26
Upk2P38575 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Upk2P38575 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk2P38575 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.67■□□□□ 0.26
Upk2P38575 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.66■□□□□ 0.26
Upk2P38575 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Upk2P38575 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.66■□□□□ 0.26
Upk2P38575 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.66■□□□□ 0.26
Upk2P38575 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk2P38575 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Upk2P38575 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.66■□□□□ 0.26
Upk2P38575 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk2P38575 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk2P38575 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk2P38575 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk2P38575 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk2P38575 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms