Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HmgclP38060 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HmgclP38060 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HmgclP38060 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.79■□□□□ 0.6
HmgclP38060 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HmgclP38060 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HmgclP38060 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HmgclP38060 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HmgclP38060 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.79■□□□□ 0.6
HmgclP38060 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HmgclP38060 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HmgclP38060 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HmgclP38060 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HmgclP38060 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.78■□□□□ 0.6
HmgclP38060 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HmgclP38060 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HmgclP38060 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HmgclP38060 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HmgclP38060 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HmgclP38060 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HmgclP38060 Iqck-206ENSMUST00000208658 2891 ntBASIC18.77■□□□□ 0.6
HmgclP38060 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HmgclP38060 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HmgclP38060 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HmgclP38060 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HmgclP38060 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HmgclP38060 Gm38205-201ENSMUST00000192243 258 ntBASIC18.76■□□□□ 0.59
HmgclP38060 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HmgclP38060 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HmgclP38060 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HmgclP38060 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HmgclP38060 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HmgclP38060 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HmgclP38060 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HmgclP38060 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.75■□□□□ 0.59
HmgclP38060 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.75■□□□□ 0.59
HmgclP38060 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.75■□□□□ 0.59
HmgclP38060 Gm9988-201ENSMUST00000069786 435 ntBASIC18.75■□□□□ 0.59
HmgclP38060 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.75■□□□□ 0.59
HmgclP38060 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HmgclP38060 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HmgclP38060 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HmgclP38060 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HmgclP38060 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.74■□□□□ 0.59
HmgclP38060 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HmgclP38060 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.74■□□□□ 0.59
HmgclP38060 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HmgclP38060 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HmgclP38060 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.73■□□□□ 0.59
HmgclP38060 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.73■□□□□ 0.59
HmgclP38060 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.73■□□□□ 0.59
HmgclP38060 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.73■□□□□ 0.59
HmgclP38060 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.73■□□□□ 0.59
HmgclP38060 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HmgclP38060 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HmgclP38060 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms