Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Foxa1P35582 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Foxa1P35582 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.62■□□□□ 0.41
Foxa1P35582 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxa1P35582 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Foxa1P35582 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Foxa1P35582 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Gm38205-201ENSMUST00000192243 258 ntBASIC17.61■□□□□ 0.41
Foxa1P35582 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Foxa1P35582 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Reep4-203ENSMUST00000226563 1444 ntBASIC17.61■□□□□ 0.41
Foxa1P35582 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Foxa1P35582 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Foxa1P35582 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.6■□□□□ 0.41
Foxa1P35582 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.6■□□□□ 0.41
Foxa1P35582 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.6■□□□□ 0.41
Foxa1P35582 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.6■□□□□ 0.41
Foxa1P35582 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Foxa1P35582 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Foxa1P35582 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.59■□□□□ 0.41
Foxa1P35582 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.59■□□□□ 0.41
Foxa1P35582 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.59■□□□□ 0.41
Foxa1P35582 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxa1P35582 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Foxa1P35582 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.59■□□□□ 0.41
Foxa1P35582 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.59■□□□□ 0.41
Foxa1P35582 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Foxa1P35582 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Foxa1P35582 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Foxa1P35582 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.59■□□□□ 0.41
Foxa1P35582 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Foxa1P35582 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Foxa1P35582 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Foxa1P35582 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxa1P35582 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Foxa1P35582 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxa1P35582 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Foxa1P35582 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.58■□□□□ 0.4
Foxa1P35582 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxa1P35582 Gm5874-201ENSMUST00000096101 508 ntBASIC17.58■□□□□ 0.4
Foxa1P35582 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxa1P35582 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxa1P35582 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Foxa1P35582 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Foxa1P35582 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Foxa1P35582 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Foxa1P35582 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxa1P35582 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxa1P35582 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.56■□□□□ 0.4
Foxa1P35582 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Foxa1P35582 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxa1P35582 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Foxa1P35582 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxa1P35582 Gm18284-201ENSMUST00000172604 624 ntBASIC17.56■□□□□ 0.4
Foxa1P35582 Gm42778-201ENSMUST00000199644 553 ntBASIC17.56■□□□□ 0.4
Foxa1P35582 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Foxa1P35582 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Foxa1P35582 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Foxa1P35582 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
Foxa1P35582 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms