Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.45■□□□□ 0.7
Mmp13P33435 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp13P33435 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.45■□□□□ 0.7
Mmp13P33435 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Mmp13P33435 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp13P33435 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.44■□□□□ 0.7
Mmp13P33435 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Mmp13P33435 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.44■□□□□ 0.7
Mmp13P33435 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp13P33435 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.44■□□□□ 0.7
Mmp13P33435 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Mmp13P33435 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Mmp13P33435 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Spcs1-204ENSMUST00000226782 949 ntBASIC19.43■□□□□ 0.7
Mmp13P33435 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Mmp13P33435 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp13P33435 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp13P33435 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp13P33435 Gm12251-201ENSMUST00000117893 792 ntBASIC19.42■□□□□ 0.7
Mmp13P33435 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.42■□□□□ 0.7
Mmp13P33435 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.42■□□□□ 0.7
Mmp13P33435 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp13P33435 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp13P33435 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp13P33435 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp13P33435 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp13P33435 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp13P33435 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp13P33435 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.41■□□□□ 0.7
Mmp13P33435 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp13P33435 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp13P33435 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp13P33435 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Mmp13P33435 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.41■□□□□ 0.7
Mmp13P33435 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Mmp13P33435 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Mmp13P33435 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp13P33435 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp13P33435 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp13P33435 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Mmp13P33435 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.39■□□□□ 0.69
Mmp13P33435 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp13P33435 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp13P33435 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Mmp13P33435 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Mmp13P33435 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp13P33435 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp13P33435 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp13P33435 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp13P33435 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Mmp13P33435 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp13P33435 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.38■□□□□ 0.69
Mmp13P33435 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp13P33435 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp13P33435 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.37■□□□□ 0.69
Mmp13P33435 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms